User:Wayne Decatur

Wayne Decatur
Postdoctoral Research Associate in the Department of Molecular, Cellular and Biomedical Sciences at the University of New Hampshire. Member of the Proteopedia Editorial Board.

Interests: small RNAs and their associated ribonucleoprotein complexes; the Ribosome; RNA modification; catalytic RNAs; homing endonucleases, group I introns; leucine-rich repeats; hormones and their receptors.

Wayne's page on the Sower Lab site

Wayne's publications listed at the the U.S. National Library of Medicine's PubMed database

email:

Molecules: Topic Pages

 * The Ribosome
 * Large Ribosomal Subunit of Haloarcula marismortui
 * Interactions between Antibiotics and the Ribosome
 * Azithromycin bound to the Large Ribosomal Subunit of Haloarcula marismortui
 * Suppression of RNA Silencing by Viruses
 * Plant Viral Protein p19 Suppression of RNA Silencing
 * Tomato aspermy virus protein 2b Suppression of RNA Silencing
 * Flock house virus B2 protein Suppression of RNA Silencing
 * Green Fluorescent Protein
 * DEAD-box helicase protein Vasa
 * Swi2/Snf2 protein RapA
 * Mfd (TRCF, transcription-repair coupling factor)
 * UvrA-UvrB interaction domains complex
 * DExD/H-box RNA-dependent ATPase DDX19 in the open and closed cleft conformation
 * C-terminal domain of the DExD/H-box RNA-dependent ATPase Dbp5
 * RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork
 * Escherichia coli LepA, the ribosomal back translocase
 * The Pore Forming Toxin, &#945;-hemolsyin
 * CED-4 Apoptosome
 * The Glutamate Receptor (GluA2)
 * Luciferase
 * Citrate Synthase
 * Lamprey Variable Lymphocyte Receptor
 * Leucine-Rich Repeat Proteins
 * Toll-like Receptors
 * Human Follicle-Stimulating Hormone Complexed with its Receptor
 * Forkhead box protein M1

Topic Pages - Structural Bioinformatics

 * About Macromolecular Structure
 * Cation-pi interactions
 * Cystine
 * Getting Unremediated PDB Files
 * Net charge
 * Isoelectric point
 * Standard Residues and Non-Standard Residues

Topic Pages - Education

 * Teaching Strategies Using Proteopedia
 * Teaching Scenes, Tutorials, and Educators' Pages
 * High school teachers' resources

Meta Pages

 * Help:Editing
 * Proteopedia:How to Make a Page
 * Proteopedia:About
 * Proteopedia:Policy
 * Proteopedia:Facebook
 * Proteopedia:Twitter
 * Jmol
 * DRuMS
 * Wanted pages
 * Pages needing expansion‎
 * Pages needing improvement‎

Workshops and Seminars

 * Workshop for the NASCE Meeting at the University of Michigan, Ann Arbor, MI July 13 2011
 * Workshop for CME at the University of New Hampshire, Durham, NH March 11 2011
 * Seminar at the University of New Hampshire, Durham, NH Feb 1st 2011
 * Biochem642 Molecular Visualization 2010 Fall Sessions
 * Biochem642 Molecular Visualization 2009 Fall Sessions
 * Proteopedia Work Session for Chem 791A-Biomolecular Structure

All Protected Pages

 * Search for User:Wayne Decatur in User Namespace

Files Uploaded

 * Files Uploaded by Wayne Decatur

Sandboxes

 * Sandbox1rpu working out configuration&isosurfaces&dots problems
 * Sandbox2hvy test for dots in another file
 * Sandbox3pla
 * Sandbox CsrA

Protected Sandbox Pages

 * My Protected Sandbox Pages

Protected Topic Pages

 * User:Wayne_Decatur/Haloarcula Large Ribosomal Subunit
 * User:Wayne_Decatur/Haloarcula Large Ribosomal Subunit With Azithromycin
 * User:Wayne Decatur/Interactions between Antibiotics and the Ribosome
 * User:Wayne Decatur/Suppression of RNA Silencing by Viruses
 * User:Wayne Decatur/Plant Viral Protein p19 Suppression of RNA Silencing
 * User:Wayne Decatur/Tomato aspermy virus protein 2b Suppression of RNA Silencing
 * User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing
 * User:Wayne_Decatur/kink-turn motif
 * User:Wayne Decatur/Teaching Proteopedia
 * User:Wayne Decatur/Editing Getting Unremediated PDB Files
 * User:Wayne Decatur/Moving Components or Parts of Structures
 * User:Wayne Decatur/Generate Unfolded Structures
 * User:Wayne Decatur/Alter Disulfide Bonds in a Structure
 * User:Wayne Decatur/Homology Modeling
 * User:Wayne Decatur/Sequence analysis tools
 * User:Wayne Decatur/Molecular modeling tools
 * User:Wayne Decatur/BioWikis
 * User:Wayne Decatur/I-Ppo Morph Methods
 * User:Wayne Decatur/3kg2 Morph Methods
 * User:Wayne Decatur/3fpn Morph methods
 * User:Wayne Decatur/3ewsSLASH3g0h Morph methods
 * User:Wayne Decatur/humanaGal3hg2toothers morph methods
 * User:Wayne Decatur/1cts to 2cts (citrate synthase) morph methods

Templates

 * My Templates

Help

 * Proteopedia:Problems
 * Jmol Command Reference Manual for advanced scene authoring.
 * Jmol Wiki

Useful Resources

 * Polyview-3D
 * Jena3D Viewer

Wikitext help

 * URLS in external links has the codes for using characters that aren't A-Z a-z 0-9 ._\/~%-+&#?!=@ in links


 * Guide to Wikitext Markup Language (wiki code)
 * How to edit illustrates use of nowiki and pre tags.
 * Wikitext quick cheat sheet also has how to make link to categories, too
 * Categories can be linked to with colon in front
 * HTML in wikitext
 * Allows cropping of images, in addition to annotating.
 * WikiTable Markup Guide
 * Editing Wikitext/Tables
 * Images: linking to articles using wikitext